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Title: PyFBA: Simulating genome-scale metabolic models
date: 2020-03-26
Author: Levi, Shane
Contributor(s): Bailey, Barbara Ann
Forsberg, Erica
College: Sciences

Title: A computational pipeline for novel phage discovery in metagenomic samples
date: 2020-03-24
Author: Giluso, Melissa
Contributor(s): Kelly, Scott
Luque, Antoni
College: Sciences

Title: An untargeted exploration of the Boechera depauperata heat-shock metabolome
date: 2019-12-17
Author: Mizar, Marina Leilani
Contributor(s): Kalyuzhnaya, Marina
Forsberg, Erica
College: Sciences

Title: Quantitative analysis of built environment microbial communities
date: 2019-10-30
Author: Xu, Ying
Contributor(s): Lipson, David A.
Yang, Mingan
College: Sciences

Title: Automation of ChromaTOF and software development for non-targeted analysis of contaminants
date: 2019-08-19
Author: Sharma, Richa Bharat Bhushan
Contributor(s): Sukumaran, Jeet
Hoh, Eunha
College: Sciences

Title: RNA-Seq analysis of the heat stress response in two Boechera species
date: 2019-08-16
Author: Schroder, Allison
Contributor(s): Kelley, Scott
Bekins, Linn
College: Sciences

Title: mRNA structure and amino acid permutation drive codon amelioration and selection in Mycobacterium tuberculosis
date: 2019-08-16
Author: O’Neill, James N.
Contributor(s): Hoffner, Sven
Waters, Elizabeth
College: Sciences

Title: Epigenetic regulation in Mycobacterium tuberculosis
date: 2019-08-15
Author: Conkle-Gutierrez, Derek Vanian
Contributor(s): Hoffner, Sven
Oren, Eyal
College: Sciences

Title: A bioinformatics approach for dengue and Zika virus substrate discovery within the human proteome
date: 2019-06-17
Author: Salami, Majid Kristopher
Contributor(s): Kelley, Scott
Edwards, Robert
College: Sciences

Title: User-customizable genome wide association study tool and “blind spots” in common sequencing platforms for M. tuberculosis
date: 2019-05-22
Author: Shmaya, Tal
Contributor(s): Hoffner, Sven
Oren, Eyal
College: Sciences

Title: Workflow for compound identification in untargeted metabolomics
date: 2019-05-17
Author: Walters, Zachary F.
Contributor(s): Waters, Elizabeth
Edwards, Robert
College: Sciences

Title: Machine-learning based identification of metagenomic source environments
date: 2019-05-14
Author: Burke, Jillian T.
Contributor(s): Kelley, Scott T.
Dinsdale, Elizabeth A.
College: Sciences

Title: Evaluating the accuracy of metabolic models using untartgeted metabolomics and flux balance analysis
date: 2019-05-07
Author: Marney, Matthew W.
Contributor(s): Kelley, Scott
Edwards, Robert
College: Sciences

Title: Genome assembly for USA100 MRSA strain 209 and Corynebacterium accolens strain AH4003
date: 2019-05-02
Author: Chen, Yingfeng
Contributor(s): Edwards, Robert
Zeller, Robert W.
College: Sciences

Title: Computational methods to analyze complex metagenomic data
date: 2018-12-18
Author: Macherla, Saichetana
Contributor(s): Edwards, Robert
Luque, Antoni
Kelly, Linda Wegley
College: Sciences

Title: Comparative analysis of gene annotation tools
date: 2018-08-06
Author: Yakoo, Sylvia
Contributor(s): Dinsdale, Elizabeth
Kelley, Scott
College: Sciences

Title: Identification of multiple and novel drug resistance in mycobacterium tuberculosis utilizing protein-protein interaction networks
date: 2018-05-30
Author: Fink, Logan D.
Contributor(s): Jamshidi, Neema
Zeller, Robert
College: Sciences

Title: The use of signature genes and motifs to evaluate genome completeness in phages
date: 2018-04-17
Author: Pande, Dnyanada Prashant
Contributor(s): Brodine, Stephanie K.
Shikuma, Nicholas J.
College: Sciences

Title: Standalone blast web application for planarian transcriptome data
date: 2018-04-13
Author: Naini, Gnanidhar Reddy
Contributor(s): Zayas, Ricardo
Atkins, Cathie
College: Sciences

Title: Characterization of fluoroquinolone resistance in mycobacterium tuberculosis clinical isolates using molecular dynamics and targeted genome wide variant analysis
date: 2018-04-11
Author: Amallraja, Anu Monica
Contributor(s): Hoffner, Sven
Love, John
College: Sciences

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